青枯病发生对番茄根际细菌与真菌群落互作的影响
作者:
作者单位:

中国科学院南京土壤研究所

中图分类号:

S436.412.15

基金项目:

国家自然科学(42377129)、国家重点研发计划项目(2023YFD1900305)和江苏省碳达峰碳中和科技创新专项(BE2022301)资助。


Impact of Tomato Bacterial Wilt on the Interaction Between Rhizosphere Bacterial and Fungal Communities
Author:
Affiliation:

Institute of soil science, Chinese academy of sciences

Fund Project:

The National Natural Science Foundation of China (No. 42377129), the National Key Research and Development Program of China (No. 2023YFD1900305) and the Special Technology Innovation Fund of Carbon Peak and Carbon Neutrality of Jiangsu Province, China (No. BE2022301)

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    摘要:

    青枯菌(Ralstonia solanacearum)作为一种极具危害性的植物病原细菌,会寄生番茄等作物引起青枯病的发生,造成宿主死亡与作物减产,严重危害农业经济。根际作为微生物-植物交互的重要场所,决定了病原菌入侵结果与植物健康状况。然而,病原菌入侵下的细菌与真菌互作过程尚不明确,限制了我们对青枯病害发生的理解。本研究通过荧光定量PCR(qPCR)量化微生物丰度,并通过高通量扩增子测序技术调查罹病和健康番茄植株的根际土壤中的细菌和真菌群落,以探究青枯菌入侵对根际细菌和真菌组成结构及互作关联的影响。结果表明,罹病和健康植株根际的细菌群落存在显著差异,罹病根际中含有更高数量的青枯菌,而健康植株的根际则显著富集了放线菌(Actinobacteria)和厚壁菌(Firmicutes),这些类群包含了更多具有生物防治潜力的有益细菌。此外,病原菌的入侵压缩了真菌在根际的生存空间,显著降低了根际中真菌的qPCR数量和生态位宽度。共线网络分析表明,罹病根际的细菌-真菌网络更为复杂,真菌节点占比显著增加(46.7% 相较于健康根际的 31.0%),其中子囊菌(Ascomycota)物种成为关键网络节点,反映出病原菌入侵增强了细菌与真菌(尤其是Ascomycota物种)之间的密切关联。在细菌与真菌的直接关联中,罹病根际的负相关占比(46.3%)明显高于健康根际(35.4%),表明病原菌引导的细菌-真菌互作关系更多呈现负向性。并且,Ascomycota和Actinobacteria是其中关键的真菌和细菌类群,分别是罹病和健康状态下的根际指示微生物,与病原菌数量呈现显著正相关(R2 = 0.393,P = 0.002)和负相关关系(R2 = 0.523,P = 0.0002)。该研究阐明了青枯菌对根际微生物群落的扰动作用,尤其是对细菌-真菌生态关联的影响结果,从根际微生物生态的角度阐释了番茄青枯病发生下的根际微生物结构特征变化,为以后的青枯病防控策略提供了理论依据。

    Abstract:

    【Objective】Ralstonia solanacearum, a highly virulent plant pathogenic bacterium, causes bacterial wilt in tomatoes and other crops, leading to host death and significant yield losses, posing a serious threat to agricultural economies. The rhizosphere, as a critical environment for plant-microbe interactions, plays a decisive role in determining the outcome of pathogen invasion and plant health. However, the interactions between bacteria and fungi in the rhizosphere under pathogen invasion remain unclear, limiting our understanding of the microbial changes associated with bacterial wilt disease.【Method】In this study, we aimed to investigate the impact of R. solanacearum invasion on the composition and interaction networks of bacterial and fungal communities in the rhizosphere of diseased and healthy tomato plants. We utilized quantitative real-time PCR (qPCR) to quantify microbial abundances and high-throughput amplicon sequencing to characterize the diversity and structure of bacterial and fungal communities. By comparing the microbial co-occurrence network in rhizosphere soils of diseased and healthy tomato plants, we sought to elucidate how pathogen invasion affects the microbial community structure and their ecological interactions.【Result】The results showed significant differences in the bacterial communities between the rhizospheres of diseased and healthy plants. The rhizosphere of diseased plants was invaded by a higher abundance of R. solanacearum, while the rhizosphere of healthy plants was significantly enriched with bacteria from the phyla Actinobacteria and Firmicutes, which include a greater number of beneficial bacteria with potential for biological control. Moreover, pathogen invasion reduced the ecological niche breadth and qPCR counts of fungi in the rhizosphere. Co-occurrence network analysis revealed that the bacterial-fungal network in diseased rhizospheres was more complex, with a significantly higher proportion of fungal nodes (46.7% compared to 31.0% in healthy rhizospheres). Among them, Ascomycota species emerged as key network nodes, indicating that pathogen invasion enhanced the close associations between bacteria and fungi (particularly Ascomycota species). In the direct bacterial-fungal interactions, the proportion of negative correlations in diseased rhizospheres (46.3%) was notably higher than in healthy rhizospheres (35.4%), suggesting that pathogen-induced interactions were predominantly antagonistic. Additionally, in the bacteria-fungi networks, Ascomycota and Actinobacteria were identified as key fungal and bacterial taxa, serving as biological indicators in diseased and healthy rhizospheres, with significant positive (R2 = 0.393, P = 0.002) and negative (R2 = 0.523, P = 0.0002) correlations with pathogen abundance, respectively.【Conclusion】This study elucidates the disruptive effects of R. solanacearum on rhizosphere microbial communities, particularly the bacterial-fungal ecological interactions, and highlights the changes in rhizosphere microbial structures under bacterial wilt. These findings provide a theoretical foundation for developing future strategies to control bacterial wilt in tomatoes.

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彭俊伟,刘勤,董元华,李建刚.青枯病发生对番茄根际细菌与真菌群落互作的影响[J].土壤学报,,[待发表]
pengjunwei, liuqin, dongyuanhua, lijiangang. Impact of Tomato Bacterial Wilt on the Interaction Between Rhizosphere Bacterial and Fungal Communities[J]. Acta Pedologica Sinica,,[In Press]

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  • 收稿日期:2024-08-29
  • 最后修改日期:2024-11-08
  • 录用日期:2024-12-12
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