【Objective】Managing soil acidification in farmland soils is of great significance to ensure national food security and sustainable agricultural development. Microorganisms have important application value in soil improvement. However, the research on alkali-producing microorganisms and the mechanism of improving acid soil is still lacking. This study aimed to systematically explore the mechanisms of acidified soil remediation by alkali-producing microorganisms, with a focus on overcoming the limitations of functional microbial resource scarcity and field application technology gaps. 【Method】Systematic screening was employed to isolate alkali-producing microorganisms from acidic soils in South China. Indoor simulation experiments evaluated its pH elevation capacity through repeated inoculation. Genomic analysis revealed its urease gene cluster (ureABCEFGD), and field trials assessed the effects of single-dose application on soil pH and crop yield. 【Result】We screened 109 alkali-producing bacterial strains (65% belonging to Bacillus spp.) and 24 fungal strains (33% Trichoderma spp.). The alkali-producing ability and stability of alkali-producing bacteria were generally stronger than those of fungi, with Lysinibacillus fusiformis LW-3 identified as a key strain. Within 15 weeks of continuous culture, repeated inoculation of L. fusiformis elevated soil pH by 1.5 units, reduced exchangeable aluminum by 23.46%, and decreased hydrolytic acid by 31.80%. Genomic analysis revealed that L. fusiformis LW-3 carried a complete urease gene cluster (ureABCEFGD). Lysinibacillus fusiformis LW-3 could ameliorate acid soil by enhancing soil urease and protease activities, metabolizing ammonia, consuming hydrogen ions through bicarbonate, and reducing the content of active and potential acids in soil. Field application confirmed that soil pH stably increased by 0.2 units and enhanced Chinese cabbage yield by 11.6%. 【Conclusion】This study elucidated a multi-pathway synergy mechanism for acidified soil remediation, including alkali production, enzymatic activity regulation, and acid speciation transformation. These findings indicate that the strain L. fusiformis LW-3 has good application prospects in acid soil amendment, providing technical support for alkaline-producing microbiome-driven soil acidification management.